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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109866705, updated on 6-Jun-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
See related
Ensembl:ENSOKIG00005019135
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: LG21
Exon count:
9
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG21 NC_034194.2 (15266784..15336858)
100 previous assembly Okis_V1 (GCF_002021735.1) LG21 NC_034194.1 (13005573..13075518)

Linkage Group LG21 - NC_034194.2Genomic Context describing neighboring genes Neighboring gene S-adenosylmethionine decarboxylase proenzyme-like Neighboring gene cyclin-dependent kinase 19 Neighboring gene probable ribonuclease ZC3H12D Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4 Neighboring gene glycoprotein integral membrane 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034194.2 Reference Okis_V2 Primary Assembly

    Range
    15266784..15336858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020455498.2 → XP_020311087.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C7GLY7, A0A8C7GRL9
    Related
    ENSOKIP00005045418.1, ENSOKIT00005047833.1
    Conserved Domains (4) summary
    smart00547
    Location:764 → 787
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:765 → 784
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  2. XM_020455501.2 → XP_020311090.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (4) summary
    smart00547
    Location:759 → 782
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:760 → 779
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  3. XM_020455505.2 → XP_020311094.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (4) summary
    smart00547
    Location:725 → 748
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:726 → 745
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  4. XM_020455502.2 → XP_020311091.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (4) summary
    smart00547
    Location:745 → 768
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:746 → 765
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  5. XM_020455506.2 → XP_020311095.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (4) summary
    smart00547
    Location:711 → 734
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:712 → 731
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  6. XM_031800231.1 → XP_031656091.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (4) summary
    smart00547
    Location:740 → 763
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:741 → 760
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  7. XM_031800235.1 → XP_031656095.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X9

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (3) summary
    smart00547
    Location:706 → 729
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:707 → 726
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  8. XM_020455503.2 → XP_020311092.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (4) summary
    smart00547
    Location:732 → 755
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:733 → 752
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  9. XM_020455499.2 → XP_020311088.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C7GLY7, A0A8C7GRL9
    Conserved Domains (4) summary
    smart00547
    Location:764 → 787
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:765 → 784
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  10. XM_031800233.1 → XP_031656093.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (4) summary
    smart00547
    Location:725 → 748
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:726 → 745
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  11. XM_020455508.2 → XP_020311097.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (2) summary
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  12. XM_020455510.2 → XP_020311099.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Related
    ENSOKIP00005045409.1, ENSOKIT00005047825.1
    Conserved Domains (2) summary
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  13. XM_020455511.2 → XP_020311100.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (2) summary
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  14. XM_020455509.2 → XP_020311098.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (2) summary
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  15. XM_020455504.2 → XP_020311093.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Related
    ENSOKIP00005045431.1, ENSOKIT00005047847.1
    Conserved Domains (4) summary
    smart00547
    Location:730 → 753
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:731 → 750
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  16. XM_020455507.2 → XP_020311096.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X10

    UniProtKB/TrEMBL
    A0A8C7GLH6, A0A8C7GLY7
    Related
    ENSOKIP00005045438.1, ENSOKIT00005047854.1
    Conserved Domains (5) summary
    smart00547
    Location:698 → 721
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:699 → 718
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1
    pfam15035
    Location:579 → 695
    Rootletin; Ciliary rootlet component, centrosome cohesion

  17. XM_031800228.1 → XP_031656088.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C7GLY7, A0A8C7GRL9
    Conserved Domains (4) summary
    smart00547
    Location:764 → 787
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:765 → 784
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  18. XM_031800230.1 → XP_031656090.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C7GLY7, A0A8C7GRL9
    Conserved Domains (4) summary
    smart00547
    Location:764 → 787
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:765 → 784
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1

  19. XM_031800232.1 → XP_031656092.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A8C7GLY7
    Conserved Domains (4) summary
    smart00547
    Location:730 → 753
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:731 → 750
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:235 → 319
    PAT1; Topoisomerase II-associated protein PAT1
Nucleotide Protein
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