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tgfb2 transforming growth factor, beta 2 [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109864860, updated on 14-Mar-2024

Summary

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Gene symbol
tgfb2
Gene description
transforming growth factor, beta 2
See related
Ensembl:ENSOKIG00005001627
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See tgfb2 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
7
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG2 NC_034175.2 (28953598..28990346, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG2 NC_034175.1 (27284821..27319742, complement)

Linkage Group LG2 - NC_034175.2Genomic Context describing neighboring genes Neighboring gene prolactin regulatory element-binding protein-like Neighboring gene lysophospholipase like 1 Neighboring gene 5.8S ribosomal RNA Neighboring gene RRP15-like protein Neighboring gene vascular endothelial growth factor A-A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type II transforming growth factor beta receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type III transforming growth factor beta receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transforming growth factor beta-2 proprotein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034175.2 Reference Okis_V2 Primary Assembly

    Range
    28953598..28990346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020452878.2 → XP_020308467.1  transforming growth factor beta-2 proprotein-like

    UniProtKB/TrEMBL
    A0A8C7CSJ3
    Related
    ENSOKIP00005003554.1, ENSOKIT00005003728.1
    Conserved Domains (2) summary
    pfam00688
    Location:21 → 228
    TGFb_propeptide; TGF-beta propeptide
    cd19385
    Location:314 → 410
    TGF_beta_TGFB2; transforming growth factor beta (TGF-beta) like domain found in transforming growth factor beta-2 (TGF-beta-2) and similar proteins
Nucleotide Protein
Heading Accession and Version

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