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beta4GalT7 beta-1,4-galactosyltransferase 7 [ Pseudomyrmex gracilis ]

Gene ID: 109861759, updated on 10-Oct-2024

Summary

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Gene symbol
beta4GalT7
Gene description
beta-1,4-galactosyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudomyrmex gracilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
Orthologs
fruit fly honey bee all
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Genomic context

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See beta4GalT7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018021581.1 (23735..25977, complement)

NW_018021581.1Genomic Context describing neighboring genes Neighboring gene X-ray repair cross-complementing protein 5-like Neighboring gene alpha-2-macroglobulin receptor-associated protein Neighboring gene putative ankyrin repeat protein RF_0381 Neighboring gene ankyrin-3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018021581.1 Unplaced Scaffold Reference ASM200609v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200609v1

Genomic

  1. NW_018021581.1 Reference ASM200609v1

    Range
    23735..25977 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020441555.1 → XP_020297144.1  beta-1,4-galactosyltransferase 7

    Conserved Domains (1) summary
    cd00899
    Location:66 → 289
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases