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LOC109858215 O-glucosyltransferase rumi homolog [ Pseudomyrmex gracilis ]

Gene ID: 109858215, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109858215
Gene description
O-glucosyltransferase rumi homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudomyrmex gracilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
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Genomic context

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See LOC109858215 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020776.1 (156827..159719, complement)

NW_018020776.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109858219 Neighboring gene Kinesin heavy chain 73 Neighboring gene uncharacterized LOC109858220 Neighboring gene Matrix metalloproteinase 1 Neighboring gene Ras GTPase activating protein 1 Neighboring gene maltase A3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018020776.1 Unplaced Scaffold Reference ASM200609v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-glucosyltransferase rumi homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200609v1

Genomic

  1. NW_018020776.1 Reference ASM200609v1

    Range
    156827..159719 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020435278.1 → XP_020290867.1  O-glucosyltransferase rumi homolog isoform X2

    Conserved Domains (1) summary
    cl23835
    Location:79 → 407
    Glyco_transf_90; Glycosyl transferase family 90

  2. XM_020435277.1 → XP_020290866.1  O-glucosyltransferase rumi homolog isoform X1

    Conserved Domains (2) summary
    cl23835
    Location:79 → 411
    Glyco_transf_90; Glycosyl transferase family 90
    cl26508
    Location:7 → 136
    NADH-G_4Fe-4S_3; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases