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LOC109858115 carbohydrate sulfotransferase 11-like [ Pseudomyrmex gracilis ]

Gene ID: 109858115, updated on 1-Oct-2024

Summary

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Gene symbol
LOC109858115
Gene description
carbohydrate sulfotransferase 11-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudomyrmex gracilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
Orthologs
honey bee all
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Genomic context

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See LOC109858115 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020773.1 (345890..348095, complement)

NW_018020773.1Genomic Context describing neighboring genes Neighboring gene epidermal growth factor receptor kinase substrate 8-like Neighboring gene Ubiquinol-cytochrome c reductase ubiquinone-binding protein Neighboring gene uncharacterized LOC109858114

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018020773.1 Unplaced Scaffold Reference ASM200609v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200609v1

Genomic

  1. NW_018020773.1 Reference ASM200609v1

    Range
    345890..348095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020435048.1 → XP_020290637.1  carbohydrate sulfotransferase 11-like isoform X2

    Conserved Domains (1) summary
    pfam03567
    Location:155 → 383
    Sulfotransfer_2; Sulfotransferase family

  2. XM_020435047.1 → XP_020290636.1  carbohydrate sulfotransferase 11-like isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:192 → 420
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases