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PIG-A phosphatidylinositol glycan anchor biosynthesis class A [ Pseudomyrmex gracilis ]

Gene ID: 109855372, updated on 10-Oct-2024

Summary

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Gene symbol
PIG-A
Gene description
phosphatidylinositol glycan anchor biosynthesis class A
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudomyrmex gracilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
Orthologs
fruit fly honey bee all
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Genomic context

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See PIG-A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020671.1 (304662..308552)

NW_018020671.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog dnj-5 Neighboring gene DNA polymerase epsilon subunit 4 Neighboring gene GIGYF family protein Gyf Neighboring gene S-phase kinase-associated protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018020671.1 Unplaced Scaffold Reference ASM200609v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200609v1

Genomic

  1. NW_018020671.1 Reference ASM200609v1

    Range
    304662..308552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020429576.1 → XP_020285165.1  N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein isoform X2

    Conserved Domains (1) summary
    cd03796
    Location:8 → 344
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...

  2. XM_020429577.1 → XP_020285166.1  N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein isoform X3

    Conserved Domains (1) summary
    cl10013
    Location:8 → 335
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

  3. XM_020429573.1 → XP_020285162.1  N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein isoform X1

    Conserved Domains (1) summary
    cd03796
    Location:8 → 373
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...

  4. XM_020429574.1 → XP_020285163.1  N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein isoform X1

    Conserved Domains (1) summary
    cd03796
    Location:8 → 373
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...

  5. XM_020429575.1 → XP_020285164.1  N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein isoform X1

    Conserved Domains (1) summary
    cd03796
    Location:8 → 373
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...
Nucleotide Protein
Heading Accession and Version

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