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LOC109854915 C-mannosyltransferase dpy-19 [ Pseudomyrmex gracilis ]

Gene ID: 109854915, updated on 10-Oct-2024

Summary

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Gene symbol
LOC109854915
Gene description
C-mannosyltransferase dpy-19
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudomyrmex gracilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
Orthologs
fruit fly honey bee all
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Genomic context

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See LOC109854915 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020659.1 (596493..601496)

NW_018020659.1Genomic Context describing neighboring genes Neighboring gene protein lozenge-like Neighboring gene brefeldin A-inhibited guanine nucleotide-exchange protein 3 Neighboring gene uncharacterized LOC109854930 Neighboring gene uncharacterized LOC109854914

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018020659.1 Unplaced Scaffold Reference ASM200609v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-mannosyltransferase dpy-19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200609v1

Genomic

  1. NW_018020659.1 Reference ASM200609v1

    Range
    596493..601496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020428518.1 → XP_020284107.1  C-mannosyltransferase dpy-19 isoform X1

    Conserved Domains (1) summary
    pfam10034
    Location:33 → 672
    Dpy19; Q-cell neuroblast polarisation

  2. XM_020428519.1 → XP_020284108.1  C-mannosyltransferase dpy-19 isoform X2

    Conserved Domains (1) summary
    pfam10034
    Location:1 → 603
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases