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LOC109854906 N-acetylgalactosaminyltransferase 6-like [ Pseudomyrmex gracilis ]

Gene ID: 109854906, updated on 1-Oct-2024

Summary

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Gene symbol
LOC109854906
Gene description
N-acetylgalactosaminyltransferase 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudomyrmex gracilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
Orthologs
honey bee all
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Genomic context

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See LOC109854906 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020658.1 (460287..464308)

NW_018020658.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 54 Neighboring gene F-box only protein 21-like Neighboring gene sentrin-specific protease 8-like Neighboring gene Hydroxyacid oxidase Neighboring gene ubiquitin carboxyl-terminal hydrolase-like faf Neighboring gene growth hormone-regulated TBC protein 1-A-like Neighboring gene eukaryotic translation initiation factor 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018020658.1 Unplaced Scaffold Reference ASM200609v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200609v1

Genomic

  1. NW_018020658.1 Reference ASM200609v1

    Range
    460287..464308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020428497.1 → XP_020284086.1  N-acetylgalactosaminyltransferase 6-like

    Conserved Domains (2) summary
    cd02510
    Location:149 → 444
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:460 → 586
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases