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LOC109853886 carbohydrate sulfotransferase 11-like [ Pseudomyrmex gracilis ]

Gene ID: 109853886, updated on 2-Oct-2024

Summary

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Gene symbol
LOC109853886
Gene description
carbohydrate sulfotransferase 11-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudomyrmex gracilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
Orthologs
honey bee all
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Genomic context

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See LOC109853886 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020640.1 (427871..429705, complement)

NW_018020640.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109853939 Neighboring gene BRCA1-associated protein Neighboring gene Ubiquitin-like activating enzyme 2 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene YTH domain containing 1 Neighboring gene Troponin C at 25D

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018020640.1 Unplaced Scaffold Reference ASM200609v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200609v1

Genomic

  1. NW_018020640.1 Reference ASM200609v1

    Range
    427871..429705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020426432.1 → XP_020282021.1  carbohydrate sulfotransferase 11-like

    Conserved Domains (1) summary
    cl22970
    Location:116 → 352
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases