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Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [ Pseudomyrmex gracilis ]

Gene ID: 109852939, updated on 10-Oct-2024

Summary

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Gene symbol
Mgat1
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudomyrmex gracilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
Orthologs
fruit fly honey bee all
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Genomic context

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See Mgat1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020624.1 (817800..822089)

NW_018020624.1Genomic Context describing neighboring genes Neighboring gene pruning defect 1 Neighboring gene T-cell activation inhibitor, mitochondrial Neighboring gene uncharacterized LOC109852930 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018020624.1 Unplaced Scaffold Reference ASM200609v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200609v1

Genomic

  1. NW_018020624.1 Reference ASM200609v1

    Range
    817800..822089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020424576.1 → XP_020280165.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (2) summary
    cd02514
    Location:149 → 476
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cl25732
    Location:36 → 110
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_020424574.1 → XP_020280163.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (2) summary
    cd02514
    Location:149 → 476
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cl25732
    Location:36 → 110
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_020424571.1 → XP_020280160.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (2) summary
    cd02514
    Location:149 → 476
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cl25732
    Location:36 → 110
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_020424573.1 → XP_020280162.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (2) summary
    cd02514
    Location:149 → 476
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cl25732
    Location:36 → 110
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_020424575.1 → XP_020280164.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (2) summary
    cd02514
    Location:149 → 476
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cl25732
    Location:36 → 110
    SMC_N; RecF/RecN/SMC N terminal domain

  6. XM_020424578.1 → XP_020280167.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (2) summary
    cd02514
    Location:149 → 476
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cl25732
    Location:36 → 110
    SMC_N; RecF/RecN/SMC N terminal domain

  7. XM_020424577.1 → XP_020280166.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (2) summary
    cd02514
    Location:149 → 476
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cl25732
    Location:36 → 110
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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