U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109851546 GPI mannosyltransferase 3 [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109851546, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109851546
Gene description
GPI mannosyltransferase 3
Locus tag
A4U43_C01F8200
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109851546 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 1 NC_033794.1 (15315343..15336182)

Chromosome 1 - NC_033794.1Genomic Context describing neighboring genes Neighboring gene target of Myb protein 1 Neighboring gene 12S seed storage globulin 2-like Neighboring gene glutelin type-B 5-like Neighboring gene probable starch synthase 4, chloroplastic/amyloplastic

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_033794.1 Chromosome 1 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033794.1 Reference Aspof.V1

    Range
    15315343..15336182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020421740.1 → XP_020277329.1  GPI mannosyltransferase 3

    UniProtKB/TrEMBL
    A0A5P1FQC6
    Conserved Domains (1) summary
    cl21590
    Location:37 → 537
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases