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LOC109846594 xyloglucan galactosyltransferase KATAMARI1 homolog [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109846594, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109846594
Gene description
xyloglucan galactosyltransferase KATAMARI1 homolog
Locus tag
A4U43_C07F1780
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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See LOC109846594 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 7 NC_033800.1 (4445619..4447040, complement)

Chromosome 7 - NC_033800.1Genomic Context describing neighboring genes Neighboring gene telomere repeat-binding protein 5-like Neighboring gene protein IWS1 homolog 1-like Neighboring gene expansin-A4 Neighboring gene factor of DNA methylation 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033800.1 Chromosome 7 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan galactosyltransferase KATAMARI1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033800.1 Reference Aspof.V1

    Range
    4445619..4447040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020415842.1 → XP_020271431.1  xyloglucan galactosyltransferase KATAMARI1 homolog

    UniProtKB/TrEMBL
    A0A5P1EAK8
    Conserved Domains (1) summary
    pfam03016
    Location:43 → 381
    Exostosin; Exostosin family
Nucleotide Protein
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