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LOC109846500 mediator of RNA polymerase II transcription subunit 23 [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109846500, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109846500
Gene description
mediator of RNA polymerase II transcription subunit 23
Locus tag
A4U43_C06F5210
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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See LOC109846500 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 6 NC_033799.1 (10145709..10164922, complement)

Chromosome 6 - NC_033799.1Genomic Context describing neighboring genes Neighboring gene uncharacterized mitochondrial protein AtMg01250-like Neighboring gene protein ODORANT1-like Neighboring gene HMG-Y-related protein A-like Neighboring gene uncharacterized LOC109845140

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033799.1 Chromosome 6 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033799.1 Reference Aspof.V1

    Range
    10145709..10164922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020415766.1 → XP_020271355.1  mediator of RNA polymerase II transcription subunit 23

    UniProtKB/TrEMBL
    A0A5P1ELY8
    Conserved Domains (1) summary
    pfam11573
    Location:707 → 1303
    Med23; Mediator complex subunit 23
Nucleotide Protein
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