U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109845189 mitochondrial arginine transporter BAC2 [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109845189, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109845189
Gene description
mitochondrial arginine transporter BAC2
Locus tag
A4U43_C06F14750
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109845189 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 6 NC_033799.1 (49401908..49407824)

Chromosome 6 - NC_033799.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109846159 Neighboring gene SMR domain-containing protein At5g58720 Neighboring gene BURP domain-containing protein 3 Neighboring gene subtilisin-like protease SBT1.5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_033799.1 Chromosome 6 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial arginine transporter BAC2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033799.1 Reference Aspof.V1

    Range
    49401908..49407824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020414409.1 → XP_020269998.1  mitochondrial arginine transporter BAC2 isoform X1

    UniProtKB/TrEMBL
    A0A5P1ELZ2
    Conserved Domains (2) summary
    pfam00153
    Location:174 → 269
    Mito_carr; Mitochondrial carrier protein
    cl28162
    Location:32 → 60
    Mito_carr; Mitochondrial carrier protein

  2. XM_020414411.1 → XP_020270000.1  mitochondrial arginine transporter BAC2 isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:140 → 235
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases