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LOC109837442 mitochondrial carnitine/acylcarnitine carrier-like protein [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109837442, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109837442
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
A4U43_C04F16790
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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See LOC109837442 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 4 NC_033797.1 (51353155..51359826, complement)

Chromosome 4 - NC_033797.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109835945 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene uncharacterized LOC109837443 Neighboring gene uncharacterized LOC109838694

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033797.1 Chromosome 4 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033797.1 Reference Aspof.V1

    Range
    51353155..51359826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020405685.1 → XP_020261274.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:106 → 199
    Mito_carr; Mitochondrial carrier protein

  2. XM_020405684.1 → XP_020261273.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:106 → 199
    Mito_carr; Mitochondrial carrier protein

  3. XM_020405683.1 → XP_020261272.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X1

    UniProtKB/TrEMBL
    A0A5P1F1F9
    Conserved Domains (1) summary
    pfam00153
    Location:129 → 222
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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