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LOC109835443 probable galacturonosyltransferase 6 [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109835443, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109835443
Gene description
probable galacturonosyltransferase 6
Locus tag
A4U43_C03F27690
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC109835443 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 3 NC_033796.1 (95213945..95222024, complement)

Chromosome 3 - NC_033796.1Genomic Context describing neighboring genes Neighboring gene thioredoxin-like 1-1, chloroplastic Neighboring gene protein ENHANCED DOWNY MILDEW 2-like Neighboring gene DNA-directed RNA polymerase V subunit 7 Neighboring gene uncharacterized LOC109835445

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033796.1 Chromosome 3 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033796.1 Reference Aspof.V1

    Range
    95213945..95222024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020403425.1 → XP_020259014.1  probable galacturonosyltransferase 6

    UniProtKB/TrEMBL
    A0A5P1FDF0
    Conserved Domains (1) summary
    cl28622
    Location:19 → 559
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
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