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LOC109833794 beta-1,3-galactosyltransferase 7-like [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109833794, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109833794
Gene description
beta-1,3-galactosyltransferase 7-like
Locus tag
A4U43_C03F15870
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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See LOC109833794 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 3 NC_033796.1 (36466769..36472552, complement)

Chromosome 3 - NC_033796.1Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 6-like Neighboring gene diaminopimelate decarboxylase 1, chloroplastic-like Neighboring gene uncharacterized LOC109833795 Neighboring gene uncharacterized LOC109832220

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033796.1 Chromosome 3 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033796.1 Reference Aspof.V1

    Range
    36466769..36472552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020401609.1 → XP_020257198.1  beta-1,3-galactosyltransferase 7-like

    UniProtKB/TrEMBL
    A0A5P1FAF2
    Conserved Domains (1) summary
    cl26217
    Location:7 → 396
    DUF4094; Domain of unknown function (DUF4094)
Nucleotide Protein
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