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LOC109828123 inositol phosphorylceramide glucuronosyltransferase 1 [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109828123, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109828123
Gene description
inositol phosphorylceramide glucuronosyltransferase 1
Locus tag
A4U43_UnF10400
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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See LOC109828123 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) Unplaced Scaffold NW_017972998.1 (43972..65236)

NW_017972998.1Genomic Context describing neighboring genes Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene uncharacterized LOC109828126 Neighboring gene actin-depolymerizing factor Neighboring gene uncharacterized LOC109828125

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017972998.1 Unplaced Scaffold Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol phosphorylceramide glucuronosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NW_017972998.1 Reference Aspof.V1

    Range
    43972..65236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020395158.1 → XP_020250747.1  inositol phosphorylceramide glucuronosyltransferase 1

    UniProtKB/TrEMBL
    A0A1R3L5H0
    Conserved Domains (1) summary
    cd02537
    Location:28 → 275
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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