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LOC109825622 alpha-1,3/1,6-mannosyltransferase ALG2-like [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109825622, updated on 18-Sep-2024

Summary

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Gene symbol
LOC109825622
Gene description
alpha-1,3/1,6-mannosyltransferase ALG2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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See LOC109825622 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 10 NC_033803.1 (1364626..1369088)

Chromosome 10 - NC_033803.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109825407 Neighboring gene uncharacterized LOC109825623 Neighboring gene uncharacterized LOC109826145 Neighboring gene binding partner of ACD11 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033803.1 Chromosome 10 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033803.1 Reference Aspof.V1

    Range
    1364626..1369088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020392481.1 → XP_020248070.1  alpha-1,3/1,6-mannosyltransferase ALG2-like

    UniProtKB/TrEMBL
    A0A5P1E2B9
    Conserved Domains (1) summary
    cd03805
    Location:9 → 394
    GT1_ALG2_like; This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2) ...
Nucleotide Protein
Heading Accession and Version

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