U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109824006 arabinosyltransferase RRA2-like [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109824006, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109824006
Gene description
arabinosyltransferase RRA2-like
Locus tag
A4U43_C09F14720
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109824006 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 9 NC_033802.1 (63341290..63348044, complement)

Chromosome 9 - NC_033802.1Genomic Context describing neighboring genes Neighboring gene putative F-box protein At1g47765 Neighboring gene acyl carrier protein 1, chloroplastic-like Neighboring gene RNA polymerase II C-terminal domain phosphatase-like 3 Neighboring gene uncharacterized LOC109824542

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_033802.1 Chromosome 9 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
arabinosyltransferase RRA2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033802.1 Reference Aspof.V1

    Range
    63341290..63348044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020390505.1 → XP_020246094.1  arabinosyltransferase RRA2-like

    UniProtKB/TrEMBL
    A0A5P1E811
    Conserved Domains (2) summary
    pfam03407
    Location:186 → 408
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
    cl26315
    Location:68 → 124
    Tropomyosin_1; Tropomyosin like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases