U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109817722 hydroxyproline O-galactosyltransferase HPGT3 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109817722, updated on 21-Dec-2023

Summary

Gene symbol
LOC109817722
Gene description
hydroxyproline O-galactosyltransferase HPGT3
Locus tag
KK1_035208
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC109817722 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) Unplaced Scaffold NW_017984319.1 (248896..255445, complement)

NW_017984319.1Genomic Context describing neighboring genes Neighboring gene exosome complex component RRP42 Neighboring gene uncharacterized LOC109817721

Genomic regions, transcripts, and products

Genomic Sequence:
NW_017984319 Unplaced Scaffold Reference C.cajan_V1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
hydroxyproline O-galactosyltransferase HPGT3
Names
putative beta-1,3-galactosyltransferase 10

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NW_017984319.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    248896..255445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020383052.2XP_020238641.1  hydroxyproline O-galactosyltransferase HPGT3

    UniProtKB/TrEMBL
    A0A151RLC6
    Conserved Domains (1) summary
    cl26217
    Location:14332
    DUF4094; Domain of unknown function (DUF4094)