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LOC109817510 glucomannan 4-beta-mannosyltransferase 9 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109817510, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109817510
Gene description
glucomannan 4-beta-mannosyltransferase 9
Locus tag
KK1_006442
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109817510 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) 2 NC_033805.1 (18723383..18729492)

Chromosome 2 - NC_033805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109819260 Neighboring gene AT-hook motif nuclear-localized protein 1 Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene transfer RNA leucine (anticodon UAA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033805.1 Chromosome 2 Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NC_033805.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    18723383..18729492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020382775.2 → XP_020238364.1  glucomannan 4-beta-mannosyltransferase 9

    UniProtKB/TrEMBL
    A0A151U3I4
    Conserved Domains (1) summary
    cd06437
    Location:87 → 323
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

  2. XM_020382782.2 → XP_020238371.1  glucomannan 4-beta-mannosyltransferase 9

    UniProtKB/TrEMBL
    A0A151U3I4
    Conserved Domains (1) summary
    cd06437
    Location:87 → 323
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
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