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LOC109812785 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109812785, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109812785
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Locus tag
KK1_027985
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109812785 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) Unplaced Scaffold NW_017984107.1 (494883..499252)

NW_017984107.1Genomic Context describing neighboring genes Neighboring gene lysM domain-containing GPI-anchored protein 2 Neighboring gene polygalacturonase QRT3 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene transfer RNA glycine (anticodon UCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017984107 Unplaced Scaffold Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Names
UDP-galactose:fucoside alpha-3-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NW_017984107.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    494883..499252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020376831.2 → XP_020232420.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    UniProtKB/TrEMBL
    A0A151S6A6
    Conserved Domains (1) summary
    pfam03407
    Location:116 → 333
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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