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LOC109812531 sterol 3-beta-glucosyltransferase UGT80B1 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109812531, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109812531
Gene description
sterol 3-beta-glucosyltransferase UGT80B1
Locus tag
KK1_027623
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109812531 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) Unplaced Scaffold NW_017984101.1 (264514..278427, complement)

NW_017984101.1Genomic Context describing neighboring genes Neighboring gene thioredoxin Y1, chloroplastic Neighboring gene uncharacterized LOC109812530 Neighboring gene G-box-binding factor 4 Neighboring gene uncharacterized LOC109812533

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017984101 Unplaced Scaffold Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol 3-beta-glucosyltransferase UGT80B1
Names
UDP-sugar-dependent glycosyltransferase 52

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NW_017984101.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    264514..278427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020376518.2 → XP_020232107.1  sterol 3-beta-glucosyltransferase UGT80B1

    UniProtKB/TrEMBL
    A0A151S6Y4
    Conserved Domains (1) summary
    cd03784
    Location:167 → 581
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
Nucleotide Protein
Heading Accession and Version

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