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LOC109810287 probable galacturonosyltransferase 12 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109810287, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109810287
Gene description
probable galacturonosyltransferase 12
Locus tag
KK1_024606
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109810287 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) Unplaced Scaffold NW_017984062.1 (590721..594747, complement)

NW_017984062.1Genomic Context describing neighboring genes Neighboring gene thioredoxin-like protein CXXS1 Neighboring gene transcription factor ILR3 Neighboring gene uncharacterized LOC109810293 Neighboring gene autophagy-related protein 18f

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017984062 Unplaced Scaffold Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 12
Names
Glycosyltransferase QUASIMODO1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NW_017984062.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    590721..594747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020373711.2 → XP_020229300.1  probable galacturonosyltransferase 12

    UniProtKB/TrEMBL
    A0A151SFF4
    Conserved Domains (1) summary
    PLN02659
    Location:1 → 531
    PLN02659; Probable galacturonosyltransferase

  2. XM_029273760.1 → XP_029129593.1  probable galacturonosyltransferase 12

    UniProtKB/TrEMBL
    A0A151SFF4
    Conserved Domains (1) summary
    PLN02659
    Location:1 → 531
    PLN02659; Probable galacturonosyltransferase
Nucleotide Protein
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