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LOC109809674 galactan beta-1,4-galactosyltransferase GALS2 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109809674, updated on 18-Aug-2023

Summary

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Gene symbol
LOC109809674
Gene description
galactan beta-1,4-galactosyltransferase GALS2
Locus tag
KK1_001251
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109809674 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) 11 NC_033814.1 (13060771..13065744)

Chromosome 11 - NC_033814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 Neighboring gene uncharacterized LOC109806978 Neighboring gene ycf3-interacting protein 1, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033814.1 Chromosome 11 Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
galactan beta-1,4-galactosyltransferase GALS2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NC_033814.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    13060771..13065744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020373048.2 → XP_020228637.1  galactan beta-1,4-galactosyltransferase GALS2 isoform X2

    UniProtKB/TrEMBL
    A0A151SJP2
    Conserved Domains (1) summary
    pfam01697
    Location:234 → 479
    Glyco_transf_92; Glycosyltransferase family 92

  2. XM_020373047.2 → XP_020228636.1  galactan beta-1,4-galactosyltransferase GALS2 isoform X1

    UniProtKB/TrEMBL
    A0A151SJP2
    Conserved Domains (1) summary
    pfam01697
    Location:234 → 479
    Glyco_transf_92; Glycosyltransferase family 92
Nucleotide Protein
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