U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109809411 probable beta-1,3-galactosyltransferase 2 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109809411, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC109809411
Gene description
probable beta-1,3-galactosyltransferase 2
Locus tag
KK1_004536
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109809411 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) 11 NC_033814.1 (48020280..48027361)

Chromosome 11 - NC_033814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109808925 Neighboring gene subtilisin-like protease SBT1.5 Neighboring gene autophagy-related protein 8C Neighboring gene uncharacterized LOC109809405

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_033814.1 Chromosome 11 Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable beta-1,3-galactosyltransferase 2
Names
putative beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NC_033814.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    48020280..48027361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020372719.2 → XP_020228308.1  probable beta-1,3-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A151SU19
    Conserved Domains (1) summary
    cl26217
    Location:1 → 381
    DUF4094; Domain of unknown function (DUF4094)

  2. XM_020372718.2 → XP_020228307.1  probable beta-1,3-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A151SU19
    Conserved Domains (1) summary
    cl26217
    Location:1 → 381
    DUF4094; Domain of unknown function (DUF4094)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases