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LOC109805574 galacturonosyltransferase 8 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109805574, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109805574
Gene description
galacturonosyltransferase 8
Locus tag
KK1_014845
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109805574 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) 10 NC_033813.1 (12317892..12321250)

Chromosome 10 - NC_033813.1Genomic Context describing neighboring genes Neighboring gene membrane protein of ER body 2 Neighboring gene uncharacterized LOC109805575 Neighboring gene ninja-family protein 4 Neighboring gene ER lumen protein-retaining receptor erd-2.2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033813.1 Chromosome 10 Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase 8
Names
Glycosyltransferase QUASIMODO1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NC_033813.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    12317892..12321250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020367714.2 → XP_020223303.1  galacturonosyltransferase 8

    UniProtKB/TrEMBL
    A0A151SX99
    Conserved Domains (1) summary
    PLN02523
    Location:27 → 578
    PLN02523; galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

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