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LOC109803127 UDP-glucose:glycoprotein glucosyltransferase [ Cajanus cajan (pigeon pea) ]

Gene ID: 109803127, updated on 25-Jan-2024

Summary

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Gene symbol
LOC109803127
Gene description
UDP-glucose:glycoprotein glucosyltransferase
Locus tag
KK1_017746
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109803127 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
37
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) 8 NC_033811.1 (19724197..19742951)

Chromosome 8 - NC_033811.1Genomic Context describing neighboring genes Neighboring gene GATA transcription factor 7-like Neighboring gene probable receptor-like protein kinase At1g11050 Neighboring gene potassium channel AKT2/3 Neighboring gene uncharacterized LOC109804584

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033811.1 Chromosome 8 Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose:glycoprotein glucosyltransferase
Names
UDP-glucose:glycoprotein glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NC_033811.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    19724197..19742951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020364576.1 → XP_020220165.1  UDP-glucose:glycoprotein glucosyltransferase

    UniProtKB/TrEMBL
    A0A151T7Z7
    Conserved Domains (2) summary
    cd06432
    Location:1312 → 1559
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:34 → 1249
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
Nucleotide Protein
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