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LOC109802053 granule-bound starch synthase 2, chloroplastic/amyloplastic [ Cajanus cajan (pigeon pea) ]

Gene ID: 109802053, updated on 18-Sep-2024

Summary

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Gene symbol
LOC109802053
Gene description
granule-bound starch synthase 2, chloroplastic/amyloplastic
Locus tag
KK1_019268
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109802053 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) 7 NC_033810.1 (15163178..15169298, complement)

Chromosome 7 - NC_033810.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At5g50390, chloroplastic Neighboring gene DCN1-like protein 2 Neighboring gene protein NRT1/ PTR FAMILY 7.3 Neighboring gene protein NRT1/ PTR FAMILY 7.2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033810.1 Chromosome 7 Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granule-bound starch synthase 2, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NC_033810.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    15163178..15169298 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020363260.2 → XP_020218849.1  granule-bound starch synthase 2, chloroplastic/amyloplastic

    Conserved Domains (1) summary
    TIGR02095
    Location:195 → 682
    glgA; glycogen/starch synthase, ADP-glucose type
Nucleotide Protein
Heading Accession and Version

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