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LOC109796183 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [ Cajanus cajan (pigeon pea) ]

Gene ID: 109796183, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109796183
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Locus tag
KK1_010669
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109796183 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) 3 NC_033806.1 (23459428..23465758, complement)

Chromosome 3 - NC_033806.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RING1-like Neighboring gene uncharacterized LOC109797098 Neighboring gene succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial Neighboring gene plastid division protein CDP1, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033806.1 Chromosome 3 Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Names
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NC_033806.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    23459428..23465758 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020355849.2 → XP_020211438.1  LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    UniProtKB/TrEMBL
    A0A151TWH7
    Conserved Domains (1) summary
    cl21590
    Location:34 → 515
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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