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LOC109793227 uncharacterized LOC109793227 [ Cajanus cajan (pigeon pea) ]

Gene ID: 109793227, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109793227
Gene description
uncharacterized LOC109793227
Locus tag
KK1_046780
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109793227 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) Unplaced Scaffold NW_017985925.1 (2101..4950, complement)

NW_017985925.1Genomic Context describing neighboring genes Neighboring gene putative clathrin assembly protein At4g40080 Neighboring gene protein MIZU-KUSSEI 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017985925 Unplaced Scaffold Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC109793227
Names
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NW_017985925.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    2101..4950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020352690.2 → XP_020208279.1  uncharacterized protein LOC109793227

    UniProtKB/TrEMBL
    A0A151QQD1
    Conserved Domains (1) summary
    pfam04724
    Location:43 → 390
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
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