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LOC109781116 dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase [ Aegilops tauschii ]

Gene ID: 109781116, updated on 11-Jan-2024

Summary

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Gene symbol
LOC109781116
Gene description
dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Genomic context

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See LOC109781116 in Genome Data Viewer
Location:
chromosome: 2D
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 2D NC_053036.2 (457961909..457965621, complement)
101 previous assembly Aet v4.0 (GCF_002575655.1) 2D NC_053036.1 (458652195..458655918, complement)

Chromosome 2D - NC_053036.2Genomic Context describing neighboring genes Neighboring gene putative adenylate cyclase regulatory protein Neighboring gene calmodulin-binding receptor-like cytoplasmic kinase 3 Neighboring gene trafficking protein particle complex subunit 2 Neighboring gene adenine phosphoribosyltransferase 2 Neighboring gene uncharacterized LOC120973588

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053036.2 Reference Aet v5.0 Primary Assembly

    Range
    457961909..457965621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020339700.3 → XP_020195289.1  dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A453CCV8, A0A453CDA5
    Conserved Domains (1) summary
    pfam04922
    Location:25 → 460
    DIE2_ALG10; DIE2/ALG10 family

  2. XM_020339699.3 → XP_020195288.1  dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A453CCV8
    Conserved Domains (1) summary
    pfam04922
    Location:25 → 466
    DIE2_ALG10; DIE2/ALG10 family

  3. XM_020339702.3 → XP_020195291.1  dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A453CDC3, A0A453CDC8
    Conserved Domains (1) summary
    pfam04922
    Location:4 → 367
    DIE2_ALG10; DIE2/ALG10 family

RNA

  1. XR_005768744.2 RNA Sequence

  2. XR_005768745.2 RNA Sequence

Nucleotide Protein
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