U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC109775821 probable galacturonosyltransferase 4 [ Aegilops tauschii ]

Gene ID: 109775821, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC109775821
Gene description
probable galacturonosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC109775821 in Genome Data Viewer
Location:
chromosome: 7D
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 7D NC_053041.2 (201272547..201305627)
101 previous assembly Aet v4.0 (GCF_002575655.1) 7D NC_053041.1 (201621963..201626211)

Chromosome 7D - NC_053041.2Genomic Context describing neighboring genes Neighboring gene probable galactinol--sucrose galactosyltransferase 1 Neighboring gene cytochrome c oxidase assembly protein COX15 Neighboring gene uncharacterized LOC120968422 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene formin-like protein 14

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable galacturonosyltransferase 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053041.2 Reference Aet v5.0 Primary Assembly

    Range
    201272547..201305627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045231457.1 → XP_045087392.1  probable galacturonosyltransferase 4 isoform X2

    Conserved Domains (1) summary
    PLN02829
    Location:84 → 574
    PLN02829; Probable galacturonosyltransferase

  2. XM_020334520.3 → XP_020190109.1  probable galacturonosyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A453RHT3, R7WFB5
    Conserved Domains (1) summary
    PLN02829
    Location:15 → 681
    PLN02829; Probable galacturonosyltransferase

RNA

  1. XR_006666780.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.