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LOC109775263 UDP-glucose:glycoprotein glucosyltransferase [ Aegilops tauschii ]

Gene ID: 109775263, updated on 25-Jan-2024

Summary

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Gene symbol
LOC109775263
Gene description
UDP-glucose:glycoprotein glucosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Genomic context

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See LOC109775263 in Genome Data Viewer
Location:
chromosome: 1D
Exon count:
37
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 1D NC_053035.2 (211542085..211569646, complement)
101 previous assembly Aet v4.0 (GCF_002575655.1) 1D NC_053035.1 (211168061..211195624, complement)

Chromosome 1D - NC_053035.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120975027 Neighboring gene uncharacterized LOC109775265 Neighboring gene rRNA 2'-O-methyltransferase fibrillarin-like Neighboring gene ubiquitin-like-specific protease ESD4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose:glycoprotein glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053035.2 Reference Aet v5.0 Primary Assembly

    Range
    211542085..211569646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020334011.3 → XP_020189600.1  UDP-glucose:glycoprotein glucosyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A452YDZ7
    Conserved Domains (6) summary
    pfam06427
    Location:1151 → 1243
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
    pfam18400
    Location:65 → 254
    Thioredoxin_12; Thioredoxin-like domain
    pfam18401
    Location:338 → 469
    Thioredoxin_13; Thioredoxin-like domain
    pfam18402
    Location:470 → 729
    Thioredoxin_14; Thioredoxin-like domain
    pfam18403
    Location:746 → 990
    Thioredoxin_15; Thioredoxin-like domain
    pfam18404
    Location:1266 → 1533
    Glyco_transf_24; Glucosyltransferase 24

  2. XM_020334010.3 → XP_020189599.1  UDP-glucose:glycoprotein glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A452YDZ7
    Conserved Domains (6) summary
    pfam06427
    Location:1151 → 1243
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
    pfam18400
    Location:65 → 254
    Thioredoxin_12; Thioredoxin-like domain
    pfam18401
    Location:338 → 469
    Thioredoxin_13; Thioredoxin-like domain
    pfam18402
    Location:470 → 729
    Thioredoxin_14; Thioredoxin-like domain
    pfam18403
    Location:746 → 990
    Thioredoxin_15; Thioredoxin-like domain
    pfam18404
    Location:1297 → 1564
    Glyco_transf_24; Glucosyltransferase 24

  3. XM_020334009.3 → XP_020189598.1  UDP-glucose:glycoprotein glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A452YDZ7
    Conserved Domains (6) summary
    pfam06427
    Location:1151 → 1243
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
    pfam18400
    Location:65 → 254
    Thioredoxin_12; Thioredoxin-like domain
    pfam18401
    Location:338 → 469
    Thioredoxin_13; Thioredoxin-like domain
    pfam18402
    Location:470 → 729
    Thioredoxin_14; Thioredoxin-like domain
    pfam18403
    Location:746 → 990
    Thioredoxin_15; Thioredoxin-like domain
    pfam18404
    Location:1302 → 1569
    Glyco_transf_24; Glucosyltransferase 24
Nucleotide Protein
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