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LOC109770871 glucan endo-1,3-beta-glucosidase 1 [ Aegilops tauschii ]

Gene ID: 109770871, updated on 11-Jan-2024

Summary

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Gene symbol
LOC109770871
Gene description
glucan endo-1,3-beta-glucosidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Genomic context

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See LOC109770871 in Genome Data Viewer
Location:
chromosome: 2D
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 2D NC_053036.2 (203763015..203769032, complement)
101 previous assembly Aet v4.0 (GCF_002575655.1) 2D NC_053036.1 (203961132..203967171, complement)

Chromosome 2D - NC_053036.2Genomic Context describing neighboring genes Neighboring gene rab3 GTPase-activating protein catalytic subunit Neighboring gene L-ascorbate oxidase homolog Neighboring gene methionine aminopeptidase 1B, chloroplastic Neighboring gene probable 5'-adenylylsulfate reductase 1, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucan endo-1,3-beta-glucosidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053036.2 Reference Aet v5.0 Primary Assembly

    Range
    203763015..203769032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020329586.2 → XP_020185175.1  glucan endo-1,3-beta-glucosidase 1

    UniProtKB/TrEMBL
    A0A453BEV4, A0A453BEV8
    Conserved Domains (2) summary
    smart00768
    Location:383 → 468
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:40 → 364
    Glyco_hydro; Glycosyl hydrolases
Nucleotide Protein
Heading Accession and Version

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