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LOC109761116 GPI mannosyltransferase 1 [ Aegilops tauschii ]

Gene ID: 109761116, updated on 11-Jan-2024

Summary

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Gene symbol
LOC109761116
Gene description
GPI mannosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Genomic context

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See LOC109761116 in Genome Data Viewer
Location:
chromosome: 5D
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 5D NC_053039.2 (456517033..456519852, complement)
101 previous assembly Aet v4.0 (GCF_002575655.1) 5D NC_053039.1 (457585223..457588077, complement)

Chromosome 5D - NC_053039.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109761104 Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic Neighboring gene leiomodin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053039.2 Reference Aet v5.0 Primary Assembly

    Range
    456517033..456519852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020319911.3 → XP_020175500.1  GPI mannosyltransferase 1

    UniProtKB/TrEMBL
    A0A453LNQ1
    Conserved Domains (1) summary
    PLN02841
    Location:1 → 443
    PLN02841; GPI mannosyltransferase
Nucleotide Protein
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