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LOC109751507 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [ Aegilops tauschii ]

Gene ID: 109751507, updated on 11-Jan-2024

Summary

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Gene symbol
LOC109751507
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Genomic context

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Location:
chromosome: 3D
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 3D NC_053037.2 (406137048..406141841, complement)
101 previous assembly Aet v4.0 (GCF_002575655.1) 3D NC_053037.1 (405713093..405717708, complement)

Chromosome 3D - NC_053037.2Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase SINA-like 10 Neighboring gene heat stress transcription factor A-4b Neighboring gene mucin-7-like Neighboring gene transcription repressor OFP1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053037.2 Reference Aet v5.0 Primary Assembly

    Range
    406137048..406141841 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020310390.3 → XP_020165979.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

    UniProtKB/TrEMBL
    A0A453FI66, N1QW66
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 877
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Nucleotide Protein
Heading Accession and Version

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