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LOC109737452 galacturonosyltransferase 8 [ Aegilops tauschii ]

Gene ID: 109737452, updated on 11-Jan-2024

Summary

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Gene symbol
LOC109737452
Gene description
galacturonosyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC109737452 in Genome Data Viewer
Location:
chromosome: 7D
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 7D NC_053041.2 (149534155..149538409, complement)
101 previous assembly Aet v4.0 (GCF_002575655.1) 7D NC_053041.1 (149701126..149705338, complement)

Chromosome 7D - NC_053041.2Genomic Context describing neighboring genes Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene laccase-4 Neighboring gene uncharacterized LOC109737455 Neighboring gene uncharacterized LOC120969311 Neighboring gene laccase-4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053041.2 Reference Aet v5.0 Primary Assembly

    Range
    149534155..149538409 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020296585.3 → XP_020152174.2  galacturonosyltransferase 8

Nucleotide Protein
Heading Accession and Version

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