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LOC109734849 probable galacturonosyltransferase-like 1 [ Aegilops tauschii ]

Gene ID: 109734849, updated on 11-Jan-2024

Summary

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Gene symbol
LOC109734849
Gene description
probable galacturonosyltransferase-like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Genomic context

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See LOC109734849 in Genome Data Viewer
Location:
chromosome: 4D
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 4D NC_053038.2 (8363993..8365279)
101 previous assembly Aet v4.0 (GCF_002575655.1) 4D NC_053038.1 (8318569..8319850)

Chromosome 4D - NC_053038.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120962678 Neighboring gene E3 ubiquitin-protein ligase RNF5 Neighboring gene phosphomethylpyrimidine synthase, chloroplastic Neighboring gene ankyrin-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053038.2 Reference Aet v5.0 Primary Assembly

    Range
    8363993..8365279
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020294028.2 → XP_020149617.1  probable galacturonosyltransferase-like 1

    UniProtKB/TrEMBL
    A0A453H0Z5
    Conserved Domains (1) summary
    pfam01501
    Location:61 → 323
    Glyco_transf_8; Glycosyl transferase family 8
Nucleotide Protein
Heading Accession and Version

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