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Mmadhc metabolism of cobalamin associated D [ Castor canadensis (American beaver) ]

Gene ID: 109698267, updated on 14-Mar-2024

Summary

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Gene symbol
Mmadhc
Gene description
metabolism of cobalamin associated D
See related
Ensembl:ENSCCNG00000019917
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Mmadhc in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017872234.1 (382811..398796, complement)

NW_017872234.1Genomic Context describing neighboring genes Neighboring gene LY6/PLAUR domain containing 6B Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene metallophosphoesterase MPPED2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017872234.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D protein, mitochondrial
Names
methylmalonic aciduria and homocystinuria type D, mitochondrial
methylmalonic aciduria and homocystinuria, cblD type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017872234.1 Reference C.can genome v1.0

    Range
    382811..398796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020182359.1 → XP_020037948.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial

    UniProtKB/TrEMBL
    A0A8B7W243
    Related
    ENSCCNP00000019876.1, ENSCCNT00000025720.1
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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