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Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 [ Castor canadensis (American beaver) ]

Gene ID: 109696298, updated on 14-Mar-2024

Summary

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Gene symbol
Dnajb6
Gene description
DnaJ heat shock protein family (Hsp40) member B6
See related
Ensembl:ENSCCNG00000022847
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Dnajb6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871800.1 (619351..677684, complement)

NW_017871800.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene ubiquitin protein ligase E3C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871800.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6
Names
dnaJ subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871800.1 Reference C.can genome v1.0

    Range
    619351..677684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020179310.1 → XP_020034899.1  dnaJ homolog subfamily B member 6 isoform X2

    UniProtKB/TrEMBL
    A0A8B7VUE4, A0A8C0X6K8
    Conserved Domains (2) summary
    PLN02647
    Location:257 → 318
    PLN02647; acyl-CoA thioesterase
    COG0484
    Location:2 → 145
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_020179309.1 → XP_020034898.1  dnaJ homolog subfamily B member 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0X6K8, A0A8C0XHE4
    Related
    ENSCCNP00000023239.1, ENSCCNT00000029707.1
    Conserved Domains (2) summary
    PLN02647
    Location:258 → 319
    PLN02647; acyl-CoA thioesterase
    COG0484
    Location:2 → 146
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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