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Poglut1 protein O-glucosyltransferase 1 [ Castor canadensis (American beaver) ]

Gene ID: 109694532, updated on 14-Mar-2024

Summary

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Gene symbol
Poglut1
Gene description
protein O-glucosyltransferase 1
See related
Ensembl:ENSCCNG00000009156
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Poglut1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871510.1 (260930..280128)

NW_017871510.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 31 Neighboring gene acyl carrier protein, mitochondrial pseudogene Neighboring gene transmembrane protein 39A Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene CD80 molecule

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871510.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871510.1 Reference C.can genome v1.0

    Range
    260930..280128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020176527.1 → XP_020032116.1  protein O-glucosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B7VJE0, A0A8C0WE16
    Related
    ENSCCNP00000008672.1, ENSCCNT00000011423.1
    Conserved Domains (1) summary
    pfam05686
    Location:126 → 465
    Glyco_transf_90; Glycosyl transferase family 90

  2. XM_020176528.1 → XP_020032117.1  protein O-glucosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A250XYF3
    Conserved Domains (1) summary
    cl23835
    Location:2 → 313
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
Heading Accession and Version

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