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Eif3l eukaryotic translation initiation factor 3 subunit L [ Castor canadensis (American beaver) ]

Gene ID: 109692727, updated on 14-Mar-2024

Summary

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Gene symbol
Eif3l
Gene description
eukaryotic translation initiation factor 3 subunit L
See related
Ensembl:ENSCCNG00000000039
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Eif3l in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017869632.1 (101493..127347)

NW_017869632.1Genomic Context describing neighboring genes Neighboring gene galanin receptor 3 Neighboring gene ankyrin repeat domain 54 Neighboring gene MICAL like 1 Neighboring gene chromosome unknown C22orf23 homolog Neighboring gene RNA polymerase II, I and III subunit F

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017869632.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3 subunit L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017869632.1 Reference C.can genome v1.0

    Range
    101493..127347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020173530.1 → XP_020029119.1  eukaryotic translation initiation factor 3 subunit L

    UniProtKB/TrEMBL
    A0A8B7VDS6
    Related
    ENSCCNP00000000036.1, ENSCCNT00000000043.1
    Conserved Domains (1) summary
    pfam10255
    Location:227 → 622
    Paf67; RNA polymerase I-associated factor PAF67
Nucleotide Protein
Heading Accession and Version

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