U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Slc25a20 solute carrier family 25 member 20 [ Castor canadensis (American beaver) ]

Gene ID: 109691987, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Slc25a20
Gene description
solute carrier family 25 member 20
See related
Ensembl:ENSCCNG00000004292
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Slc25a20 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871176.1 (190442..225002)

NW_017871176.1Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase, transmembrane Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene ARIH2 opposite strand lncRNA Neighboring gene 60S ribosomal protein L35 pseudogene Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene inositol hexakisphosphate kinase 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_017871176.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables low-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871176.1 Reference C.can genome v1.0

    Range
    190442..225002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020172306.1 → XP_020027895.1  mitochondrial carnitine/acylcarnitine carrier protein

    UniProtKB/TrEMBL
    A0A250YEY7
    Related
    ENSCCNP00000004058.1, ENSCCNT00000005314.1
    Conserved Domains (1) summary
    pfam00153
    Location:106 → 198
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.