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LOC109689193 cyclin-dependent kinase-like 5 [ Castor canadensis (American beaver) ]

Gene ID: 109689193, updated on 9-Nov-2023

Summary

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Gene symbol
LOC109689193
Gene description
cyclin-dependent kinase-like 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC109689193 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870850.1 (92411..162274)

NW_017870850.1Genomic Context describing neighboring genes Neighboring gene retinoschisin 1 Neighboring gene cyclin dependent kinase like 5 Neighboring gene gap junction alpha-1 protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870850.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dendrite development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase-like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870850.1 Reference C.can genome v1.0

    Range
    92411..162274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020167943.1 → XP_020023532.1  cyclin-dependent kinase-like 5

    UniProtKB/TrEMBL
    A0A8B7UWP5
    Conserved Domains (1) summary
    cl21453
    Location:11 → 276
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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