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Zbtb44 zinc finger and BTB domain containing 44 [ Castor canadensis (American beaver) ]

Gene ID: 109688553, updated on 14-Mar-2024

Summary

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Gene symbol
Zbtb44
Gene description
zinc finger and BTB domain containing 44
See related
Ensembl:ENSCCNG00000013116
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870739.1 (490377..554639, complement)

NW_017870739.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor like protein 2 Neighboring gene ST14 transmembrane serine protease matriptase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870739.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870739.1 Reference C.can genome v1.0

    Range
    490377..554639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020166978.1 → XP_020022567.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A8B7USE2
    Related
    ENSCCNP00000012644.1, ENSCCNT00000016601.1
    Conserved Domains (6) summary
    COG5048
    Location:382 → 448
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:400 → 420
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:488 → 510
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:486 → 507
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 127
    BTB; BTB/POZ domain
    pfam13465
    Location:412 → 437
    zf-H2C2_2; Zinc-finger double domain

  2. XM_020166979.1 → XP_020022568.1  zinc finger and BTB domain-containing protein 44 isoform X2

    UniProtKB/TrEMBL
    A0A8B7USN9
    Conserved Domains (4) summary
    COG5048
    Location:350 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:471 → 493
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 127
    BTB; BTB/POZ domain

  3. XM_020166977.1 → XP_020022566.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A8B7USE2
    Related
    ENSCCNP00000012640.1, ENSCCNT00000016596.1
    Conserved Domains (6) summary
    COG5048
    Location:382 → 448
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:400 → 420
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:488 → 510
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:486 → 507
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 127
    BTB; BTB/POZ domain
    pfam13465
    Location:412 → 437
    zf-H2C2_2; Zinc-finger double domain

  4. XM_020166981.1 → XP_020022570.1  zinc finger and BTB domain-containing protein 44 isoform X3

    UniProtKB/TrEMBL
    A0A250YI74
    Conserved Domains (4) summary
    COG5048
    Location:382 → 448
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:400 → 420
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 127
    BTB; BTB/POZ domain
    pfam13465
    Location:412 → 437
    zf-H2C2_2; Zinc-finger double domain

  5. XM_020166980.1 → XP_020022569.1  zinc finger and BTB domain-containing protein 44 isoform X3

    UniProtKB/TrEMBL
    A0A250YI74
    Conserved Domains (4) summary
    COG5048
    Location:382 → 448
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:400 → 420
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 127
    BTB; BTB/POZ domain
    pfam13465
    Location:412 → 437
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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