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Mydgf myeloid derived growth factor [ Castor canadensis (American beaver) ]

Gene ID: 109687820, updated on 14-Mar-2024

Summary

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Gene symbol
Mydgf
Gene description
myeloid derived growth factor
See related
Ensembl:ENSCCNG00000030283
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Mydgf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870647.1 (614389..625357, complement)

NW_017870647.1Genomic Context describing neighboring genes Neighboring gene basic proline-rich protein-like Neighboring gene TNF alpha induced protein 8 like 1 Neighboring gene dipeptidyl peptidase 9 Neighboring gene transfer RNA glycine (anticodon UCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870647.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of endothelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: myeloid-derived growth factor
Names
UPF0556 protein C19orf10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870647.1 Reference C.can genome v1.0

    Range
    614389..625357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020165893.1 → XP_020021482.1  LOW QUALITY PROTEIN: myeloid-derived growth factor

    UniProtKB/TrEMBL
    A0A250YB12, A0A8B7UQA7
    Related
    ENSCCNP00000031862.1, ENSCCNT00000040038.1
    Conserved Domains (1) summary
    pfam10572
    Location:21 → 175
    UPF0556; Uncharacterized protein family UPF0556
Nucleotide Protein
Heading Accession and Version

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