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Creb3l3 cAMP responsive element binding protein 3 like 3 [ Castor canadensis (American beaver) ]

Gene ID: 109687810, updated on 14-Mar-2024

Summary

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Gene symbol
Creb3l3
Gene description
cAMP responsive element binding protein 3 like 3
See related
Ensembl:ENSCCNG00000030181
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Creb3l3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870647.1 (263984..278363)

NW_017870647.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 7A Neighboring gene mitogen-activated protein kinase kinase 2 Neighboring gene sirtuin 6 Neighboring gene ankyrin repeat domain 24

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870647.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cyclic AMP-responsive element-binding protein 3-like protein 3
Names
cyclic AMP-responsive element-binding protein 3-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870647.1 Reference C.can genome v1.0

    Range
    263984..278363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020165876.1 → XP_020021465.1  LOW QUALITY PROTEIN: cyclic AMP-responsive element-binding protein 3-like protein 3

    UniProtKB/TrEMBL
    A0A8B7UT88, A0A8C0XU04
    Related
    ENSCCNP00000031718.1, ENSCCNT00000039878.1
    Conserved Domains (1) summary
    cd14689
    Location:226 → 286
    bZIP_CREB3; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 3 (CREB3) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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