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St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [ Castor canadensis (American beaver) ]

Gene ID: 109684988, updated on 14-Mar-2024

Summary

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Gene symbol
St3gal2
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 2
See related
Ensembl:ENSCCNG00000009198
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See St3gal2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870313.1 (279737..330168, complement)

NW_017870313.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase DDX19A Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene tropomyosin-1 Neighboring gene fucose kinase Neighboring gene component of oligomeric golgi complex 4 Neighboring gene splicing factor 3b subunit 3 Neighboring gene thymosin beta-10 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870313.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870313.1 Reference C.can genome v1.0

    Range
    279737..330168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020161638.1 → XP_020017227.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2

    UniProtKB/TrEMBL
    A0A250YG58
    Related
    ENSCCNP00000008714.1, ENSCCNT00000011483.1
    Conserved Domains (1) summary
    pfam00777
    Location:95 → 348
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_020161637.1 → XP_020017226.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2

    UniProtKB/TrEMBL
    A0A250YG58
    Conserved Domains (1) summary
    pfam00777
    Location:95 → 348
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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